Stem-loop nbr-let-7a-4

Accession

MI0034310

Description

Neolamprologus brichardi nbr-let-7a-4 precursor miRNA

Sequence

90476 reads, 5159.0 reads per million, 7 experiments

UGAGGUAGUAGGUUGUAUAGUUuuagggucauacccacacugggagauaaCUAUUCAACCUACUGUCUUUCc
.((((((((((((((.((((((.....(((...((((...)))).))))))))).))))))))))))))...

Structure

--U              U      uuagg   aua    c 
   GAGGUAGUAGGUUG AUAGUU     guc   ccca  
   |||||||||||||| ||||||     |||   |||| a
   UUCUGUCAUCCAAC UAUCaa     uag   gggu  
cCU              U      -----   --a    c 

Annotation confidence High

Genome context

JH422342.1: 2308524-2308595 [-]

Mature nbr-let-7a-5p

• Accession: MIMAT0042483
• Description: Neolamprologus brichardi nbr-let-7a-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-let-7a-4-3p

• Accession: MIMAT0060109
• Description: Neolamprologus brichardi nbr-let-7a-4-3p mature miRNA
• Sequence: 51 - CUAUUCAACCUACUGUCUUUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381