Stem-loop nbr-mir-22a

Accession

MI0034314

Description

Neolamprologus brichardi nbr-mir-22a precursor miRNA

Sequence

509737 reads, 29055.0 reads per million, 7 experiments

AGUUCUUCACUGGCAAGCUUUAuguccucauguaccagcuaAAGCUGCCAGCUGAAGAACUGU
(((((((((((((((.((((((.((............)))))))))))))).)))))))))..

Structure

--         -      A      u  ccuca 
  AGUUCUUCA CUGGCA GCUUUA gu     u
  ||||||||| |||||| |||||| ||      
  UCAAGAAGU GACCGU CGAAau cg     g
UG         C      -      -  accau 

Annotation confidence High

Genome context

JH422360.1: 301877-301939 [-]

Mature nbr-miR-22a-5p

• Accession: MIMAT0060114
• Description: Neolamprologus brichardi nbr-miR-22a-5p mature miRNA
• Sequence: 1 - AGUUCUUCACUGGCAAGCUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-22a-3p

• Accession: MIMAT0042485
• Description: Neolamprologus brichardi nbr-miR-22a-3p mature miRNA
• Sequence: 42 - AAGCUGCCAGCUGAAGAACUGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381