Stem-loop nbr-mir-135a

Accession

MI0034322

Description

Neolamprologus brichardi nbr-mir-135a precursor miRNA

Sequence

10335 reads, 658.0 reads per million, 7 experiments

UAUGGCUUUUUAUUCCUAUCUGacuguacuuaugguucAUAUAGGGAUGGAAGCCAUGCA
((((((((((.((((((((.(((((((....)))).))).))))))))))))))))))..

Structure

--          U        C   -    a 
  UAUGGCUUUU AUUCCUAU UGa cugu c
  |||||||||| |||||||| ||| ||||  
  GUACCGAAGG UAGGGAUA Acu ggua u
AC          -        U   u    u 

Annotation confidence High

Genome context

JH422281.1: 5089838-5089897 [+]

Mature nbr-miR-135a-5p

• Accession: MIMAT0042491
• Description: Neolamprologus brichardi nbr-miR-135a-5p mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUAUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-135a-3p

• Accession: MIMAT0060121
• Description: Neolamprologus brichardi nbr-miR-135a-3p mature miRNA
• Sequence: 39 - AUAUAGGGAUGGAAGCCAUGCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381