Stem-loop nbr-mir-184b

Accession

MI0034326

Description

Neolamprologus brichardi nbr-mir-184b precursor miRNA

Sequence

443921 reads, 24169.0 reads per million, 7 experiments

CCUUAUCACUUUUCCAGCCCAGCuaucuauuaaauguuuguUGGACGGAGAACUGAUAAGGG
((((((((.((((((.(.(((((...(........)...))))).))))))).)))))))).

Structure

-        C      A C     uau uau 
 CCUUAUCA UUUUCC G CCAGC   c   u
 |||||||| |||||| | |||||   |    
 GGAAUAGU AAGAGG C GGUug   g   a
G        C      - A     uuu uaa 

Annotation confidence High

Genome context

JH422288.1: 2949614-2949675 [+]

Mature nbr-miR-184b-5p

• Accession: MIMAT0060123
• Description: Neolamprologus brichardi nbr-miR-184b-5p mature miRNA
• Sequence: 1 - CCUUAUCACUUUUCCAGCCCAGC - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-184b-3p

• Accession: MIMAT0042494
• Description: Neolamprologus brichardi nbr-miR-184b-3p mature miRNA
• Sequence: 42 - UGGACGGAGAACUGAUAAGGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381