Stem-loop nbr-mir-92b

Accession

MI0034329

Description

Neolamprologus brichardi nbr-mir-92b precursor miRNA

Sequence

309577 reads, 19025.0 reads per million, 7 experiments

cAGGUCCGGGACGUGGUGCGCUGUUgucauaucuccccuccaaUAUUGCACUCGUCCCGGCCUCC
.(((.((((((((.((((((.(((((..............))))).)))))))))))))))))..

Structure

-c   U        U      C     ucauau 
  AGG CCGGGACG GGUGCG UGUUg      c
  ||| |||||||| |||||| |||||       
  UCC GGCCCUGC UCACGU AUaac      u
CC   -        -      U     cucccc 

Annotation confidence High

Genome context

JH422557.1: 92458-92522 [-]

Mature nbr-miR-92b-5p

• Accession: MIMAT0060127
• Description: Neolamprologus brichardi nbr-miR-92b-5p mature miRNA
• Sequence: 2 - AGGUCCGGGACGUGGUGCGCUGUU - 25
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-92b-3p

• Accession: MIMAT0042497
• Description: Neolamprologus brichardi nbr-miR-92b-3p mature miRNA
• Sequence: 44 - UAUUGCACUCGUCCCGGCCUCC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381