Stem-loop nbr-mir-103

Accession

MI0034338

Description

Neolamprologus brichardi nbr-mir-103 precursor miRNA

Literature search

1 open access papers mention nbr-mir-103
(3 sentences)

Sequence

12973 reads, 768.0 reads per million, 7 experiments

AGCCUCUUUACGGUGCUGCCUUGUGccgucuugaucaAGCAGCAUUGUACAGGGCUAUGA
((((.((.(((((((((((.(((..(......)..)))))))))))))).))))))....

Structure

----    U  U           C   UG cg 
    AGCC CU UACGGUGCUGC UUG  c  u
    |||| || ||||||||||| |||  |   
    UCGG GA AUGUUACGACG Aac  g  c
AGUA    -  C           -   ua uu 

Annotation confidence High

Genome context

JH422282.1: 7098222-7098281 [+]

Mature nbr-miR-103-5p

• Accession: MIMAT0060136
• Description: Neolamprologus brichardi nbr-miR-103-5p mature miRNA
• Sequence: 1 - AGCCUCUUUACGGUGCUGCCUUGUG - 25
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-103-3p

• Accession: MIMAT0042502
• Description: Neolamprologus brichardi nbr-miR-103-3p mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAUGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381