miRBase entry: nbr-mir-99b

Stem-loop nbr-mir-99b

Accession

MI0034341

Description

Neolamprologus brichardi nbr-mir-99b precursor miRNA

Sequence

AACCCGUAGAUCCGAUCUUGUGgcaaaugugacagcacaagcucgccucugugggucuu
.(((((((((..(((.((((((.............)))))).)))..)))))))))...

Structure

--A         UC   U      gcaaa 
   ACCCGUAGA  CGA CUUGUG     u
   |||||||||  ||| ||||||     g
   ugggugucu  gcu gaacac     u
uuc         cc   c      gacag

Annotation confidence Not enough data

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Genome context

JH422457.1: 315456-315514 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from nbr-mir-99b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-99b

Accession	MIMAT0042505
Description	Neolamprologus brichardi nbr-miR-99b mature miRNA
Sequence	1 - AACCCGUAGAUCCGAUCUUGUG - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381