Stem-loop nbr-mir-206

Accession

MI0034344

Description

Neolamprologus brichardi nbr-mir-206 precursor miRNA

Sequence

1528715 reads, 83344.0 reads per million, 7 experiments

ACAUGCUUCCUUAUAUCCCCAUAuuaauacgccacuuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.............))))).))))))))))))))))..

Structure

--                CC     uuaau 
  ACAUGCUUCCUUAUAU  CCAUA     a
  ||||||||||||||||  |||||     c
  UGUGUGAAGGAAUGUA  GGUau     g
GG                -A     ucacc 

Annotation confidence High

Genome context

JH422321.1: 2411015-2411074 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-206

Mature nbr-miR-206-5p

• Accession: MIMAT0060142
• Description: Neolamprologus brichardi nbr-miR-206-5p mature miRNA
• Sequence: 1 - ACAUGCUUCCUUAUAUCCCCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-206-3p

• Accession: MIMAT0042508
• Description: Neolamprologus brichardi nbr-miR-206-3p mature miRNA
• Sequence: 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381