Stem-loop nbr-mir-724-1

Accession

MI0034346

Description

Neolamprologus brichardi nbr-mir-724-1 precursor miRNA

Sequence

18060 reads, 1030.0 reads per million, 7 experiments

UUAAAGGGAAUUUGCGACUGUUaaucaaaccauucgaaCAGCCACACCUUCCUUUUAAGAU
((((((((((..((.(.(((((..............))))).).))..))))))))))...

Structure

---          UU  C A     aaucaa 
   UUAAAGGGAA  UG G CUGUU      a
   ||||||||||  || | |||||       
   AAUUUUCCUU  AC C GACaa      c
UAG          CC  A C     gcuuac 

Annotation confidence High

Genome context

JH422281.1: 9934960-9935020 [-]

Mature nbr-miR-724-5p

• Accession: MIMAT0042509
• Description: Neolamprologus brichardi nbr-miR-724-5p mature miRNA
• Sequence: 1 - UUAAAGGGAAUUUGCGACUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-724-3p

• Accession: MIMAT0060143
• Description: Neolamprologus brichardi nbr-miR-724-3p mature miRNA
• Sequence: 39 - CAGCCACACCUUCCUUUUAAGAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381