Stem-loop nbr-mir-142-2

Accession

MI0034377

Description

Neolamprologus brichardi nbr-mir-142-2 precursor miRNA

Sequence

969 reads, 63.0 reads per million, 7 experiments

CAUAAAGUAGAAAGCACUACUaaacuuuacuacacaguguAGUGUUUCCUACUUUAUGGAUG
((((((((((.(((((((((..................))))))))).))))))))))....

Structure

----          A         Uaaacuuu 
    CAUAAAGUAG AAGCACUAC        a
    |||||||||| |||||||||         
    GUAUUUCAUC UUUGUGAug        c
GUAG          C         ugacacau 

Annotation confidence Medium

Genome context

JH422353.1: 198918-198979 [-]

Mature nbr-miR-142-5p

• Accession: MIMAT0042531
• Description: Neolamprologus brichardi nbr-miR-142-5p mature miRNA
• Sequence: 1 - CAUAAAGUAGAAAGCACUACU - 21
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-142-3p

• Accession: MIMAT0060170
• Description: Neolamprologus brichardi nbr-miR-142-3p mature miRNA
• Sequence: 41 - AGUGUUUCCUACUUUAUGGAUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381