miRBase entry: nbr-mir-23a-2

Stem-loop nbr-mir-23a-2

Accession

MI0034389

Description

Neolamprologus brichardi nbr-mir-23a-2 precursor miRNA

Sequence

ggguuccuggcaccgugauuugaugcacaaagagaaacaaaaAUCACAUUGCCAGGGAUUUCCA
((((((((((((..(((((((...................)))))))..))))))))))..)).

Structure

-  --          cc       gaugcaca 
 gg  guuccuggca  gugauuu        a
 ||  ||||||||||  |||||||        a
 CC  UAGGGACCGU  CACUAaa        g
A  UU          UA       aacaaaga

Annotation confidence Not enough data

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Genome context

JH422373.1: 1150451-1150514 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from nbr-mir-23a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-23a

Accession	MIMAT0042542
Description	Neolamprologus brichardi nbr-miR-23a mature miRNA
Sequence	43 - AUCACAUUGCCAGGGAUUUCCA - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381