miRBase entry: nbr-mir-1-1

Stem-loop nbr-mir-1-1

Accession

MI0034390

Description

Neolamprologus brichardi nbr-mir-1-1 precursor miRNA

Sequence

cauacuucuuuauguacccauaugaacauaugauagcuaUGGAAUGUAAAGAAGUAUGUAU
(((((((((((((((..(((((...............))))).)))))))))))))))...

Structure

---               ac     ugaaca 
   cauacuucuuuaugu  ccaua      u
   |||||||||||||||  |||||      a
   GUAUGAAGAAAUGUA  GGUau      u
UAU               -A     cgauag

Annotation confidence Not enough data

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Genome context

JH422296.1: 385670-385730 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-1-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-1

Accession	MIMAT0042543
Description	Neolamprologus brichardi nbr-miR-1 mature miRNA
Sequence	40 - UGGAAUGUAAAGAAGUAUGUAU - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381