Stem-loop nbr-mir-1-1

Accession

MI0034390

Description

Neolamprologus brichardi nbr-mir-1-1 precursor miRNA

Sequence

cauacuucuuuauguacccauaugaacauaugauagcuaUGGAAUGUAAAGAAGUAUGUAU
(((((((((((((((..(((((...............))))).)))))))))))))))...

Structure

---               ac     ugaaca 
   cauacuucuuuaugu  ccaua      u
   |||||||||||||||  |||||      a
   GUAUGAAGAAAUGUA  GGUau      u
UAU               -A     cgauag 

Annotation confidence Not enough data

Genome context

JH422296.1: 385670-385730 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-1-1

Mature nbr-miR-1

• Accession: MIMAT0042543
• Description: Neolamprologus brichardi nbr-miR-1 mature miRNA
• Sequence: 40 - UGGAAUGUAAAGAAGUAUGUAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381