Stem-loop nbr-mir-129-2

Accession

MI0034397

Description

Neolamprologus brichardi nbr-mir-129-2 precursor miRNA

Sequence

39601 reads, 2118.0 reads per million, 7 experiments

CUUUUUGCGGUCUGGGCUUGCugucaugugucuauccaggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.(((.............))).))))))..))).)))))))...

Structure

---       C   CU      G   ucaug 
   CUUUUUG GGU  GGGCUU Cug     u
   ||||||| |||  |||||| |||     g
   GAAAAAC CCA  CCCGAA gac     u
UAC       C   UU      g   cuauc 

Annotation confidence High

Genome context

JH422288.1: 5219397-5219458 [+]

Mature nbr-miR-129-5p

• Accession: MIMAT0042546
• Description: Neolamprologus brichardi nbr-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-129-3p

• Accession: MIMAT0060182
• Description: Neolamprologus brichardi nbr-miR-129-3p mature miRNA
• Sequence: 41 - AAGCCCUUACCCCAAAAAGCAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381