Stem-loop nbr-mir-129-1

Accession

MI0034398

Description

Neolamprologus brichardi nbr-mir-129-1 precursor miRNA

Sequence

39604 reads, 2119.0 reads per million, 7 experiments

CUUUUUGCGGUCUGGGCUUGCuguucauaacuauuaaucugggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.((..................)).))))))..))).)))))))...

Structure

---       C   CU      G  guucauaa 
   CUUUUUG GGU  GGGCUU Cu        c
   ||||||| |||  |||||| ||         
   GAAAAAC CCA  CCCGAA gg        u
UAC       C   UU      g  ucuaauua 

Annotation confidence High

Genome context

JH422276.1: 10085423-10085487 [+]

Mature nbr-miR-129-5p

• Accession: MIMAT0042546
• Description: Neolamprologus brichardi nbr-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-129-3p

• Accession: MIMAT0060182
• Description: Neolamprologus brichardi nbr-miR-129-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGCAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381