Stem-loop nbr-mir-7-4

Accession

MI0034403

Description

Neolamprologus brichardi nbr-mir-7-4 precursor miRNA

Sequence

27846 reads, 1489.0 reads per million, 7 experiments

UGGAAGACUAGUGAUUUUGUUGUuuguuguuuuaaaaggacAACAAAUCAUUGUCUCCCUC
.((.((((.((((((((.(((((((.((......)).))))))))))))))))))).))..

Structure

-U  A    U        U       g  gu 
  GG AGAC AGUGAUUU GUUGUuu uu  u
  || |||| |||||||| ||||||| ||   
  CC UCUG UUACUAAA CAAcagg aa  u
CU  C    -        -       a  au 

Annotation confidence Not enough data

Genome context

JH422356.1: 1536715-1536775 [+]

Mature nbr-miR-7-5p

• Accession: MIMAT0042549
• Description: Neolamprologus brichardi nbr-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-7-4-3p

• Accession: MIMAT0060187
• Description: Neolamprologus brichardi nbr-miR-7-4-3p mature miRNA
• Sequence: 42 - AACAAAUCAUUGUCUCCCUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381