Stem-loop nbr-mir-7-2

Accession

MI0034404

Description

Neolamprologus brichardi nbr-mir-7-2 precursor miRNA

Sequence

27588 reads, 1474.0 reads per million, 7 experiments

UGGAAGACUAGUGAUUUUGUUGUuguaaauucauguuuuugaCAACAGAGUCACAGUCUACCUCG
.((.(((((.(((((((((((((((.((((....)))).)))))))))))))))))))).))...

Structure

--U  A     A               u    u 
   GG AGACU GUGAUUUUGUUGUug aaau c
   || ||||| ||||||||||||||| ||||  
   CC UCUGA CACUGAGACAACagu uuug a
GCU  A     -               u    u 

Annotation confidence Not enough data

Genome context

JH422322.1: 3949317-3949381 [-]

Mature nbr-miR-7-5p

• Accession: MIMAT0042549
• Description: Neolamprologus brichardi nbr-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-7-2-3p

• Accession: MIMAT0060185
• Description: Neolamprologus brichardi nbr-miR-7-2-3p mature miRNA
• Sequence: 43 - CAACAGAGUCACAGUCUACCUCG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381