Stem-loop nbr-mir-15a

Accession

MI0034409

Description

Neolamprologus brichardi nbr-mir-15a precursor miRNA

Sequence

UAGCAGCACGGAAUGGUUUGUGgguuauacugagaugcaggccauacugugcugccgca
..(((((((((.((((((((((..(((...)))..)))))))))).)))))))))....

Structure

--UA         A          gg   u 
    GCAGCACGG AUGGUUUGUG  uua  
    ||||||||| ||||||||||  ||| a
    cgucguguc uaccggacgu  agu  
acgc         a          ag   c 

Annotation confidence Not enough data

Genome context

JH422286.1: 2608850-2608908 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-15a

Mature nbr-miR-15a

• Accession: MIMAT0042553
• Description: Neolamprologus brichardi nbr-miR-15a mature miRNA
• Sequence: 1 - UAGCAGCACGGAAUGGUUUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381