Stem-loop nbr-mir-499

Accession

MI0034412

Description

Neolamprologus brichardi nbr-mir-499 precursor miRNA

Sequence

6144 reads, 334.0 reads per million, 7 experiments

UUAAGACUUGCAGUGAUGUUUAgggcaaugaucacaugAACAUCACUUUAAGUCUGUGCU
...(((((((.(((((((((((.(..........).))))))))))).))))))).....

Structure

--UUA       C           g gcaa 
     AGACUUG AGUGAUGUUUA g    u
     ||||||| ||||||||||| |     
     UCUGAAU UCACUACAAgu c    g
UCGUG       U           a acua 

Annotation confidence High

Genome context

JH422279.1: 12458197-12458256 [-]

Mature nbr-miR-499-5p

• Accession: MIMAT0042555
• Description: Neolamprologus brichardi nbr-miR-499-5p mature miRNA
• Sequence: 1 - UUAAGACUUGCAGUGAUGUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-499-3p

• Accession: MIMAT0060191
• Description: Neolamprologus brichardi nbr-miR-499-3p mature miRNA
• Sequence: 39 - AACAUCACUUUAAGUCUGUGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381