Stem-loop nbr-mir-101b

Accession

MI0034420

Description

Neolamprologus brichardi nbr-mir-101b precursor miRNA

Sequence

328 reads, 20.0 reads per million, 7 experiments

CAGUUAUCAUGGUACCGGUGCUGUgucccucucaagUACAGUACUAUGAUAACUGAA
(((((((((((((((..(((((............))))).)))))))))))))))..

Structure

--               CG     GUguc 
  CAGUUAUCAUGGUAC  GUGCU     c
  |||||||||||||||  |||||      
  GUCAAUAGUAUCAUG  CAUga     c
AA               -A     acucu 

Annotation confidence High

Genome context

JH422287.1: 1919245-1919301 [+]

Mature nbr-miR-101b-5p

• Accession: MIMAT0060198
• Description: Neolamprologus brichardi nbr-miR-101b-5p mature miRNA
• Sequence: 1 - CAGUUAUCAUGGUACCGGUGCUGU - 24
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-101b-3p

• Accession: MIMAT0042562
• Description: Neolamprologus brichardi nbr-miR-101b-3p mature miRNA
• Sequence: 37 - UACAGUACUAUGAUAACUGAA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381