Stem-loop nbr-mir-730

Accession

MI0034428

Description

Neolamprologus brichardi nbr-mir-730 precursor miRNA

Sequence

170 reads, 10.0 reads per million, 7 experiments

UCCUCAUUGUGCAUGCUGUGUGuauuucuguguguaccaCACAGCGCCUGCAAUGUGGAGGc
(((.((((((...((((((((((((........))).)))))))))...)))))).)))...

Structure

---   U      GCA         -   uuc 
   UCC CAUUGU   UGCUGUGUG uau   u
   ||| ||||||   ||||||||| |||    
   AGG GUAACG   GCGACACac aug   g
cGG   U      UCC         c   ugu 

Annotation confidence High

Genome context

JH422450.1: 319083-319144 [+]

Mature nbr-miR-730-5p

• Accession: MIMAT0042570
• Description: Neolamprologus brichardi nbr-miR-730-5p mature miRNA
• Sequence: 1 - UCCUCAUUGUGCAUGCUGUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-730-3p

• Accession: MIMAT0060206
• Description: Neolamprologus brichardi nbr-miR-730-3p mature miRNA
• Sequence: 40 - CACAGCGCCUGCAAUGUGGAGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381