miRBase entry: nbr-mir-155

Stem-loop nbr-mir-155


Accession
MI0034429
Description
Neolamprologus brichardi nbr-mir-155 precursor miRNA


Sequence

574 reads, 33.0 reads per million, 7 experiments
UUAAUGCUAAUCGUGAUAGGGGUuguucuuauuaacagacaccuaacauguuagcauuagcu
((((((((((.((((.(((((..((((......))))..).)))).))))))))))))))..

Structure
--          U    A    - GU    cu 
  UUAAUGCUAA CGUG UAGG G  uguu  u
  |||||||||| |||| |||| |  ||||   
  gauuacgauu guac aucc c  acaa  a
uc          -    a    a ag    uu 


Annotation confidence Not enough data
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Genome context
JH422273.1: 20880886-20880947 [-]

Database links

Mature nbr-miR-155-5p

Accession MIMAT0042571
Description Neolamprologus brichardi nbr-miR-155-5p mature miRNA
Sequence 1 - UUAAUGCUAAUCGUGAUAGGGGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381