Stem-loop nbr-mir-205-2

Accession

MI0034447

Description

Neolamprologus brichardi nbr-mir-205-2 precursor miRNA

Sequence

251278 reads, 14849.0 reads per million, 7 experiments

UCCUUCAUUCCACCGGAGUCUGuaucuguauuugaccagaUUUCAGUGGUGUGAAGUGUAAG
..((((((.((((.((((((((..((.......)).)))))))).)))).))))))......

Structure

----UC      U    C        ua  ug 
      CUUCAU CCAC GGAGUCUG  uc  u
      |||||| |||| ||||||||  ||  a
      GAAGUG GGUG CUUUagac  ag  u
GAAUGU      U    A        -c  uu 

Annotation confidence High

Genome context

JH422304.1: 2921411-2921472 [+]

Mature nbr-miR-205-5p

• Accession: MIMAT0042484
• Description: Neolamprologus brichardi nbr-miR-205-5p mature miRNA
• Sequence: 1 - UCCUUCAUUCCACCGGAGUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-205-2-3p

• Accession: MIMAT0060113
• Description: Neolamprologus brichardi nbr-miR-205-2-3p mature miRNA
• Sequence: 41 - UUUCAGUGGUGUGAAGUGUAAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381