Stem-loop nbr-mir-204-3

Accession

MI0034448

Description

Neolamprologus brichardi nbr-mir-204-3 precursor miRNA

Sequence

54420 reads, 3095.0 reads per million, 7 experiments

UUCCCUUUGUCAUCCUAUGCCUggauuaauacaaaagggGCUGGGAAGGCAAAGGGACGGc
.((((((((((.(((((.((((...............))))))))).))))))))))....

Structure

---U          A     U    ggauua 
    UCCCUUUGUC UCCUA GCCU      a
    |||||||||| ||||| ||||      u
    AGGGAAACGG AGGGU CGgg      a
cGGC          A     -    gaaaac 

Annotation confidence High

Genome context

JH422279.1: 850171-850231 [+]

Mature nbr-miR-204-5p

• Accession: MIMAT0042473
• Description: Neolamprologus brichardi nbr-miR-204-5p mature miRNA
• Sequence: 1 - UUCCCUUUGUCAUCCUAUGCCU - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-204-3-3p

• Accession: MIMAT0060091
• Description: Neolamprologus brichardi nbr-miR-204-3-3p mature miRNA
• Sequence: 40 - GCUGGGAAGGCAAAGGGACGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381