miRBase entry: nbr-mir-19b-2

Stem-loop nbr-mir-19b-2

Accession

MI0034451

Description

Neolamprologus brichardi nbr-mir-19b-2 precursor miRNA

Sequence

uaguuuugcugguuugcuuucagcuuuuaaauguacugcUGUGCAAAUCCAUGCAAAACUG
(((((((((((((((((...((((.............)))).))))).))).)))))))))

Structure

         -   -     uuu    uuuua 
uaguuuugc ugg uuugc   cagc     a
||||||||| ||| |||||   ||||     a
GUCAAAACG ACC AAACG   GUcg     u
         U   U     --U    ucaug

Annotation confidence Not enough data

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Genome context

JH422286.1: 6064610-6064670 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from nbr-mir-19b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-19b

Accession	MIMAT0042503
Description	Neolamprologus brichardi nbr-miR-19b mature miRNA
Sequence	40 - UGUGCAAAUCCAUGCAAAACUG - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381