Stem-loop nbr-mir-124-2

Accession

MI0034457

Description

Neolamprologus brichardi nbr-mir-124-2 precursor miRNA

Sequence

8013 reads, 490.0 reads per million, 7 experiments

CGUGUUCACAGCGGACCUUGAUUuaaauguccauacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..((((((((.............))))))))..))).)))))))).

Structure

C        A   GA        uaaau 
 GUGUUCAC GCG  CCUUGAUU     g
 |||||||| |||  ||||||||     u
 CGUAAGUG CGC  GGAAUuaa     c
C        G   AC        cauac 

Annotation confidence High

Genome context

JH422301.1: 5607796-5607854 [-]

Mature nbr-miR-124-5p

• Accession: MIMAT0060214
• Description: Neolamprologus brichardi nbr-miR-124-5p mature miRNA
• Sequence: 1 - CGUGUUCACAGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-124-3p

• Accession: MIMAT0042577
• Description: Neolamprologus brichardi nbr-miR-124-3p mature miRNA
• Sequence: 40 - UAAGGCACGCGGUGAAUGCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381