Stem-loop nbr-mir-29a

Accession

MI0034462

Description

Neolamprologus brichardi nbr-mir-29a precursor miRNA

Sequence

cgauuucuuucgguguucagagucugcuucuguuucUAGCACCAUUUGAAAUCGGUUA
(((((((....((((((.((((...((....))))))))))))....)))))))....

Structure

----       uuuc      c    ucu  u 
    cgauuuc    gguguu agag   gc u
    |||||||    |||||| ||||   ||  
    GCUAAAG    CCACGA Ucuu   ug c
AUUG       UUUA      -    ---  u 

Annotation confidence Not enough data

Genome context

JH422304.1: 2583793-2583850 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-29a

Mature nbr-miR-29a

• Accession: MIMAT0042584
• Description: Neolamprologus brichardi nbr-miR-29a mature miRNA
• Sequence: 37 - UAGCACCAUUUGAAAUCGGUUA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381