Stem-loop nbr-mir-29b

Accession

MI0034464

Description

Neolamprologus brichardi nbr-mir-29b precursor miRNA

Sequence

agcugguuucagaugguggcuuagaguauugucaucuaucUAGCACCAUUUGAAAUCAGUGUU
.(((((((((((((((((.((((((.........))))...)))))))))))))))))))...

Structure

--a                 g  ---    gua 
   gcugguuucagauggug cu   uaga   u
   ||||||||||||||||| ||   ||||   u
   UGACUAAAGUUUACCAC GA   aucu   g
UUG                 -  Ucu    acu 

Annotation confidence Not enough data

Genome context

JH422304.1: 2584042-2584104 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-29b

Mature nbr-miR-29b

• Accession: MIMAT0042585
• Description: Neolamprologus brichardi nbr-miR-29b mature miRNA
• Sequence: 41 - UAGCACCAUUUGAAAUCAGUGUU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381