miRBase entry: nbr-mir-132b

Stem-loop nbr-mir-132b

Accession

MI0034467

Description

Neolamprologus brichardi nbr-mir-132b precursor miRNA

Sequence

ACCGUGGCUUUAGAUUGUUACUcuagcaacagcaccaugguaacagucuacagccaugguc
(((((((((.((((((((((((...((....)).....)))))))))))).))))))))).

Structure

-         U            --cua  a 
 ACCGUGGCU UAGAUUGUUACU     gc a
 ||||||||| ||||||||||||     ||  
 ugguaccga aucugacaaugg     cg c
c         c            uacca  a

Annotation confidence Not enough data

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Genome context

JH422512.1: 165486-165546 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-132b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-132b

Accession	MIMAT0042588
Description	Neolamprologus brichardi nbr-miR-132b mature miRNA
Sequence	1 - ACCGUGGCUUUAGAUUGUUACU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381