Stem-loop nbr-mir-216a

Accession

MI0034476

Description

Neolamprologus brichardi nbr-mir-216a precursor miRNA

Sequence

AAAUCUCAGCUGGCAACUGUGAgucguucacuagcugcucucacaauggccucugggauuaug
.((((((((..(((...((((((..((.........)).))))))...))).))))))))...

Structure

--A        CU   AAC      uc  uca 
   AAUCUCAG  GGC   UGUGAg  gu   c
   ||||||||  |||   ||||||  ||   u
   uuaggguc  ccg   acacuc  cg   a
gua        -u   gua      -u  ucg 

Annotation confidence Not enough data

Genome context

JH422278.1: 13972675-13972737 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-216a

Mature nbr-miR-216a

• Accession: MIMAT0042596
• Description: Neolamprologus brichardi nbr-miR-216a mature miRNA
• Sequence: 1 - AAAUCUCAGCUGGCAACUGUGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381