Stem-loop nbr-mir-722-2

Accession

MI0034479

Description

Neolamprologus brichardi nbr-mir-722-2 precursor miRNA

Sequence

315 reads, 20.0 reads per million, 7 experiments

uuugaaacguuuuagccaaaaauguuuccauggucaagguguuUUUUGCAGAAACGUUUCAGAUU
(((((((((((((.((.(((((((...((........))))))))).)).)))))))))))))..

Structure

--             a  c       uuu  aug 
  uuugaaacguuuu gc aaaaaug   cc   g
  ||||||||||||| || |||||||   ||    
  AGACUUUGCAAAG CG UUUuugu   gg   u
UU             A  U       ---  aac 

Annotation confidence Not enough data

Genome context

JH422293.1: 756180-756244 [+]

Mature nbr-miR-722-3p

• Accession: MIMAT0042599
• Description: Neolamprologus brichardi nbr-miR-722-3p mature miRNA
• Sequence: 44 - UUUUGCAGAAACGUUUCAGAUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381