Stem-loop nbr-mir-7133

Accession

MI0034491

Description

Neolamprologus brichardi nbr-mir-7133 precursor miRNA

Sequence

GAUGUUGAGUAUCAAACUGUAUguuauguaugcuauauaUAGUUUGAUACACAGCACAAUA
..(((((.((((((((((((((((..........)))))))))))))))).))))).....

Structure

---GA     A                uaug 
     UGUUG GUAUCAAACUGUAUgu    u
     ||||| ||||||||||||||||     
     ACGAC CAUAGUUUGAUauaua    a
AUAAC     A                ucgu 

Annotation confidence Not enough data

Genome context

JH422387.1: 1870989-1871049 [+]

Mature nbr-miR-7133-5p

• Accession: MIMAT0042611
• Description: Neolamprologus brichardi nbr-miR-7133-5p mature miRNA
• Sequence: 1 - GAUGUUGAGUAUCAAACUGUAU - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-7133-3p

• Accession: MIMAT0042612
• Description: Neolamprologus brichardi nbr-miR-7133-3p mature miRNA
• Sequence: 40 - UAGUUUGAUACACAGCACAAUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381