Stem-loop nbr-mir-181a

Accession

MI0034494

Description

Neolamprologus brichardi nbr-mir-181a precursor miRNA

Literature search

1 open access papers mention nbr-mir-181a
(2 sentences)

Sequence

23885 reads, 1538.0 reads per million, 7 experiments

CACAUUCAUCGCUGUCGGUGGGuuaguaaugccauaaaCUCGCCGGGCGAUGAAUGACAAc
..(((((((((((..(((((((((.((......)).)))))))))))))))))))).....

Structure

---CA           GU         a  aa 
     CAUUCAUCGCU  CGGUGGGuu gu  u
     |||||||||||  ||||||||| ||   
     GUAAGUAGCGG  GCCGCUCaa ua  g
cAACA           --         a  cc 

Annotation confidence High

Genome context

JH422428.1: 332062-332122 [-]

Mature nbr-miR-181a-5p

• Accession: MIMAT0042615
• Description: Neolamprologus brichardi nbr-miR-181a-5p mature miRNA
• Sequence: 1 - CACAUUCAUCGCUGUCGGUGGG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-181a-3p

• Accession: MIMAT0060240
• Description: Neolamprologus brichardi nbr-miR-181a-3p mature miRNA
• Sequence: 39 - CUCGCCGGGCGAUGAAUGACAA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381