Stem-loop nbr-mir-449b

Accession

MI0034510

Description

Neolamprologus brichardi nbr-mir-449b precursor miRNA

Sequence

UGGCAGUGUAAUGUUAGCUGACguuucuucagccagcucacacugcucugcuacu
((((((.(((.(((.(((((.(.........).))))).))).))).))))))..

Structure

--      U   A   U     A guu 
  UGGCAG GUA UGU AGCUG C   u
  |||||| ||| ||| ||||| |   c
  aucguc cgu aca ucgac g   u
uc      u   c   c     c acu 

Annotation confidence Not enough data

Genome context

JH422289.1: 7633479-7633533 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-449b

Mature nbr-miR-449b

• Accession: MIMAT0042634
• Description: Neolamprologus brichardi nbr-miR-449b mature miRNA
• Sequence: 1 - UGGCAGUGUAAUGUUAGCUGAC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381