Stem-loop nbr-mir-8159

Accession

MI0034516

Description

Neolamprologus brichardi nbr-mir-8159 precursor miRNA

Sequence

12832 reads, 668.0 reads per million, 7 experiments

UCAGUAACUGGAAUCUGUCCCUGCaugguaaaagugugcAGGGCCUGGCUGGUUACUGCACc
.((((((((((.....(.(((((((((.......))))))))).)...))))))))))....

Structure

---U          AAUCU U         gu 
    CAGUAACUGG     G CCCUGCaug  a
    ||||||||||     | |||||||||  a
    GUCAUUGGUC     C GGGAcgugu  a
cCAC          --GGU C         ga 

Annotation confidence High

Genome context

JH422361.1: 1923162-1923223 [+]

Mature nbr-miR-8159-5p

• Accession: MIMAT0042640
• Description: Neolamprologus brichardi nbr-miR-8159-5p mature miRNA
• Sequence: 1 - UCAGUAACUGGAAUCUGUCCCUGC - 24
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-8159-3p

• Accession: MIMAT0060253
• Description: Neolamprologus brichardi nbr-miR-8159-3p mature miRNA
• Sequence: 40 - AGGGCCUGGCUGGUUACUGCAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381