Stem-loop nbr-mir-8160

Accession

MI0034517

Description

Neolamprologus brichardi nbr-mir-8160 precursor miRNA

Sequence

1101 reads, 73.0 reads per million, 7 experiments

AGAAUAAUGCCAGCAGUCGGUCguggugucccagggaccagcacugguguuauugaga
..(((((((((((..((.((((.(((....)))..)))).)).)))))))))))....

Structure

--AG           CA  C    -g   u 
    AAUAAUGCCAG  GU GGUC  ugg g
    |||||||||||  || ||||  |||  
    uuauugugguc  cg ccag  acc u
agag           -a  a    gg   c 

Annotation confidence Not enough data

Genome context

JH422281.1: 658590-658647 [+]

Mature nbr-miR-8160-5p

• Accession: MIMAT0042641
• Description: Neolamprologus brichardi nbr-miR-8160-5p mature miRNA
• Sequence: 1 - AGAAUAAUGCCAGCAGUCGGUC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381