Stem-loop oni-mir-135c

Accession

MI0034681

Description

Oreochromis niloticus oni-mir-135c precursor miRNA

Sequence

UAUGGCUUUUUAUUCCUAUGUGAugaugaaaaguguucAUGUAGGAACAGAAGCCAUUUU
.(((((((((..(((((((((((..((.....))..))))))))))).)))))))))...

Structure

--U         UA           ug  g 
   AUGGCUUUU  UUCCUAUGUGA  au a
   |||||||||  |||||||||||  || a
   UACCGAAGA  AAGGAUGUAcu  ug a
UUU         -C           ug  a 

Annotation confidence Not enough data

Genome context

CM001450.1: 43728716-43728775 [-]

Mature oni-miR-135c

• Accession: MIMAT0042756
• Description: Oreochromis niloticus oni-miR-135c mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-135c-3p

• Accession: MIMAT0042757
• Description: Oreochromis niloticus oni-miR-135c-3p mature miRNA
• Sequence: 39 - AUGUAGGAACAGAAGCCAUUUU - 60
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774