Stem-loop oni-mir-723b

Accession

MI0034756

Description

Oreochromis niloticus oni-mir-723b precursor miRNA

Sequence

142213 reads, 145.0 reads per million, 70 experiments

gGCAGUUUUGAUGAUGUUACUUUUuuaauuuuaagaAGACAUCAGAUAAAUCUGUCCU
(((((.((((.((((((..((((((.......))))))))))))..)))).)))))..

Structure

--     U    -A      UA      ua 
  gGCAG UUUG  UGAUGU  CUUUUu  a
  ||||| ||||  ||||||  ||||||  u
  CUGUC AAAU  ACUACA  GAagaa  u
UC     U    AG      --      uu 

Annotation confidence High

Genome context

CM001451.1: 3753771-3753828 [+]

Mature oni-miR-723b-5p

• Accession: MIMAT0059497
• Description: Oreochromis niloticus oni-miR-723b-5p mature miRNA
• Sequence: 2 - GCAGUUUUGAUGAUGUUACUUUU - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-723b-3p

• Accession: MIMAT0042809
• Description: Oreochromis niloticus oni-miR-723b-3p mature miRNA
• Sequence: 37 - AGACAUCAGAUAAAUCUGUCCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381