Stem-loop oni-mir-7133-1

Accession

MI0034766

Description

Oreochromis niloticus oni-mir-7133-1 precursor miRNA

Sequence

112353 reads, 128.0 reads per million, 105 experiments

GAUGUUGAGUAUCAAACUGUAUguuauguaugcuauauaUAGUUUGAUACACAGCACAAUA
..(((((.((((((((((((((((..........)))))))))))))))).))))).....

Structure

---GA     A                uaug 
     UGUUG GUAUCAAACUGUAUgu    u
     ||||| ||||||||||||||||     
     ACGAC CAUAGUUUGAUauaua    a
AUAAC     A                ucgu 

Annotation confidence High

Genome context

AERX01077347.1: 258-318 [+]

Mature oni-miR-7133-5p

• Accession: MIMAT0042827
• Description: Oreochromis niloticus oni-miR-7133-5p mature miRNA
• Sequence: 1 - GAUGUUGAGUAUCAAACUGUAU - 22
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-7133-3p

• Accession: MIMAT0059499
• Description: Oreochromis niloticus oni-miR-7133-3p mature miRNA
• Sequence: 40 - UAGUUUGAUACACAGCACAAUA - 61
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774