Stem-loop oni-mir-10574

Accession

MI0034777

Description

Oreochromis niloticus oni-mir-10574 precursor miRNA

Sequence

65749 reads, 74.0 reads per million, 116 experiments

AAGAUAGAAUGAGAUGAGGACUuuuuuuuuuuuuuuuggUCCUCAUCUUGUCCCAUUUUCA
(((((.(.((((((((((((((...............)))))))))))))).).)))))..

Structure

--     A A              uuuuuu 
  AAGAU G AUGAGAUGAGGACU      u
  ||||| | ||||||||||||||      u
  UUUUA C UGUUCUACUCCUgg      u
AC     C C              uuuuuu 

Annotation confidence High

Genome context

GL831288.1: 1017652-1017712 [-]

Mature oni-miR-10574-5p

• Accession: MIMAT0042840
• Description: Oreochromis niloticus oni-miR-10574-5p mature miRNA
• Sequence: 1 - AAGAUAGAAUGAGAUGAGGACU - 22
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-10574-3p

• Accession: MIMAT0059509
• Description: Oreochromis niloticus oni-miR-10574-3p mature miRNA
• Sequence: 40 - UCCUCAUCUUGUCCCAUUUUCA - 61
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774