Stem-loop pny-mir-204-2

Accession

MI0034808

Description

Pundamilia nyererei pny-mir-204-2 precursor miRNA

Sequence

39717 reads, 3328.0 reads per million, 7 experiments

UUCCCUUUGUCAUCCUAUGCCUggaacuuggauaagGCAGGGACAGCAAAGGGAUGC
.(((((((((..((((.(((((............)))))))))..)))))))))...

Structure

--U         CA    A     ggaac 
   UCCCUUUGU  UCCU UGCCU     u
   |||||||||  |||| |||||      
   AGGGAAACG  AGGG ACGga     u
CGU         AC    -     auagg 

Annotation confidence High

Genome context

JH419240.1: 3068150-3068206 [+]

Mature pny-miR-204-5p

• Accession: MIMAT0042863
• Description: Pundamilia nyererei pny-miR-204-5p mature miRNA
• Sequence: 1 - UUCCCUUUGUCAUCCUAUGCCU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-204-2-3p

• Accession: MIMAT0060270
• Description: Pundamilia nyererei pny-miR-204-2-3p mature miRNA
• Sequence: 37 - GCAGGGACAGCAAAGGGAUGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381