Stem-loop pny-mir-26a-1

Accession

MI0034809

Description

Pundamilia nyererei pny-mir-26a-1 precursor miRNA

Sequence

187772 reads, 15730.0 reads per million, 7 experiments

UUCAAGUAAUCCAGGAUAGGCUuguuaaaguggggaaagCCUAUUCGGGAUGACUUGGUUC
.((((((.((((.((((((((((.............)))))))))).)))).))))))...

Structure

--U      A    A          guuaa 
   UCAAGU AUCC GGAUAGGCUu     a
   |||||| |||| ||||||||||     g
   GGUUCA UAGG CUUAUCCgaa     u
CUU      G    G          agggg 

Annotation confidence High

Genome context

JH419276.1: 2247349-2247409 [-]

Mature pny-miR-26a-5p

• Accession: MIMAT0042865
• Description: Pundamilia nyererei pny-miR-26a-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-26a-1-3p

• Accession: MIMAT0060273
• Description: Pundamilia nyererei pny-miR-26a-1-3p mature miRNA
• Sequence: 40 - CCUAUUCGGGAUGACUUGGUUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381