Stem-loop pny-mir-26a-3

Accession

MI0034812

Description

Pundamilia nyererei pny-mir-26a-3 precursor miRNA

Sequence

171163 reads, 14570.0 reads per million, 7 experiments

UUCAAGUAAUCCAGGAUAGGCUgguuaacacugcacggCCUAUUCUUGAUUACUUGUUUC
..(((((((((.(((((((((((((.......)).))))))))))).)))))))))....

Structure

--UU         C           -  ua 
    CAAGUAAUC AGGAUAGGCUg gu  a
    ||||||||| ||||||||||| ||  c
    GUUCAUUAG UCUUAUCCggc cg  a
CUUU         U           a  uc 

Annotation confidence High

Genome context

JH419311.1: 1799170-1799229 [-]

Mature pny-miR-26a-5p

• Accession: MIMAT0042865
• Description: Pundamilia nyererei pny-miR-26a-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-26a-3-3p

• Accession: MIMAT0060275
• Description: Pundamilia nyererei pny-miR-26a-3-3p mature miRNA
• Sequence: 39 - CCUAUUCUUGAUUACUUGUUUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381