Stem-loop pny-mir-184b

Accession

MI0034818

Description

Pundamilia nyererei pny-mir-184b precursor miRNA

Sequence

261588 reads, 23509.0 reads per million, 7 experiments

CCUUAUCACUUUUCCAGCCCAGCuaucuauuaaauguuuguUGGACGGAGAACUGAUAAGGG
((((((((.((((((.(.(((((...(........)...))))).))))))).)))))))).

Structure

-        C      A C     uau uau 
 CCUUAUCA UUUUCC G CCAGC   c   u
 |||||||| |||||| | |||||   |    
 GGAAUAGU AAGAGG C GGUug   g   a
G        C      - A     uuu uaa 

Annotation confidence High

Genome context

JH419240.1: 2127423-2127484 [-]

Mature pny-miR-184b-5p

• Accession: MIMAT0060279
• Description: Pundamilia nyererei pny-miR-184b-5p mature miRNA
• Sequence: 1 - CCUUAUCACUUUUCCAGCCCAGC - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-184b-3p

• Accession: MIMAT0042868
• Description: Pundamilia nyererei pny-miR-184b-3p mature miRNA
• Sequence: 42 - UGGACGGAGAACUGAUAAGGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381