Stem-loop pny-mir-126

Accession

MI0034837

Description

Pundamilia nyererei pny-mir-126 precursor miRNA

Sequence

28181 reads, 2366.0 reads per million, 7 experiments

CAUUAUUACUUUUGGUACGCGcuaugccacucucaacUCGUACCGUGAGUAAUAAUGCA
(((((((((((.(((((((.(...............).))))))).)))))))))))..

Structure

--           U       C cuaugc 
  CAUUAUUACUU UGGUACG G      c
  ||||||||||| ||||||| |      a
  GUAAUAAUGAG GCCAUGC c      c
AC           U       U aacucu 

Annotation confidence High

Genome context

JH419207.1: 3748364-3748422 [+]

Mature pny-miR-126-5p

• Accession: MIMAT0042879
• Description: Pundamilia nyererei pny-miR-126-5p mature miRNA
• Sequence: 1 - CAUUAUUACUUUUGGUACGCG - 21
• Evidence: experimental ; Illumina [1]

Mature pny-miR-126-3p

• Accession: MIMAT0060297
• Description: Pundamilia nyererei pny-miR-126-3p mature miRNA
• Sequence: 38 - UCGUACCGUGAGUAAUAAUGCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381