Stem-loop pny-mir-103-2

Accession

MI0034846

Description

Pundamilia nyererei pny-mir-103-2 precursor miRNA

Sequence

9727 reads, 806.0 reads per million, 7 experiments

AGCCUCUUUACGGUGCUGCCUUGUgccgucuugaucaAGCAGCAUUGUACAGGGCUAUGA
((((.((.(((((((((((.(((..(......)..)))))))))))))).))))))....

Structure

----    U  U           C   Ug cg 
    AGCC CU UACGGUGCUGC UUG  c  u
    |||| || ||||||||||| |||  |   
    UCGG GA AUGUUACGACG Aac  g  c
AGUA    -  C           -   ua uu 

Annotation confidence High

Genome context

JH419234.1: 4671586-4671645 [+]

Mature pny-miR-103-2-5p

• Accession: MIMAT0060306
• Description: Pundamilia nyererei pny-miR-103-2-5p mature miRNA
• Sequence: 1 - AGCCUCUUUACGGUGCUGCCUUGU - 24
• Evidence: experimental ; Illumina [1]

Mature pny-miR-103-3p

• Accession: MIMAT0042885
• Description: Pundamilia nyererei pny-miR-103-3p mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAUGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381