Stem-loop pny-mir-724-1

Accession

MI0034847

Description

Pundamilia nyererei pny-mir-724-1 precursor miRNA

Sequence

18817 reads, 1623.0 reads per million, 7 experiments

UUAAAGGGAAUUUGCGACUGUUaaucaaaccauucgaaCAGCCACACCUUCCUUUUAAGA
((((((((((..((.(.(((((..............))))).).))..))))))))))..

Structure

--          UU  C A     aaucaa 
  UUAAAGGGAA  UG G CUGUU      a
  ||||||||||  || | |||||       
  AAUUUUCCUU  AC C GACaa      c
AG          CC  A C     gcuuac 

Annotation confidence High

Genome context

JH419252.1: 3632399-3632458 [+]

Mature pny-miR-724-5p

• Accession: MIMAT0042886
• Description: Pundamilia nyererei pny-miR-724-5p mature miRNA
• Sequence: 1 - UUAAAGGGAAUUUGCGACUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-724-3p

• Accession: MIMAT0060308
• Description: Pundamilia nyererei pny-miR-724-3p mature miRNA
• Sequence: 39 - CAGCCACACCUUCCUUUUAAGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381