Stem-loop pny-mir-724-2

Accession

MI0034848

Description

Pundamilia nyererei pny-mir-724-2 precursor miRNA

Sequence

32155 reads, 2796.0 reads per million, 7 experiments

UUAAAGGGAAUUUGCGACUGUUagucaaaacauuagaaCAGCCACACCUUCCUUUUAAGA
((((((((((..((.(.(((((..............))))).).))..))))))))))..

Structure

--          UU  C A     agucaa 
  UUAAAGGGAA  UG G CUGUU      a
  ||||||||||  || | |||||       
  AAUUUUCCUU  AC C GACaa      a
AG          CC  A C     gauuac 

Annotation confidence High

Genome context

JH419247.1: 4004081-4004140 [+]

Mature pny-miR-724-5p

• Accession: MIMAT0042886
• Description: Pundamilia nyererei pny-miR-724-5p mature miRNA
• Sequence: 1 - UUAAAGGGAAUUUGCGACUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-724-3p

• Accession: MIMAT0060308
• Description: Pundamilia nyererei pny-miR-724-3p mature miRNA
• Sequence: 39 - CAGCCACACCUUCCUUUUAAGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381