Stem-loop pny-mir-455

Accession

MI0034853

Description

Pundamilia nyererei pny-mir-455 precursor miRNA

Sequence

7509 reads, 645.0 reads per million, 7 experiments

UAUGUGCCCUUGGACUACAUCGuggaagccagcaccaUGCAGUCCAUGGGCAUAUACAC
(((((((((.((((((.(((.(((........))).))).)))))).)))))))))...

Structure

---         U      A   C   gaa 
   UAUGUGCCC UGGACU CAU Gug   g
   ||||||||| |||||| ||| |||    
   AUAUACGGG ACCUGA GUa cac   c
CAC         U      C   c   gac 

Annotation confidence High

Genome context

JH419207.1: 5929145-5929203 [-]

Mature pny-miR-455-5p

• Accession: MIMAT0042891
• Description: Pundamilia nyererei pny-miR-455-5p mature miRNA
• Sequence: 1 - UAUGUGCCCUUGGACUACAUCG - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-455-3p

• Accession: MIMAT0060314
• Description: Pundamilia nyererei pny-miR-455-3p mature miRNA
• Sequence: 38 - UGCAGUCCAUGGGCAUAUACAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381