Stem-loop pny-mir-124-2

Accession

MI0034864

Description

Pundamilia nyererei pny-mir-124-2 precursor miRNA

Sequence

4353 reads, 361.0 reads per million, 7 experiments

CGUGUUCACAGCGGACCUUGAUUuaaauguccauacaauUAAGGCACGCGGUGAAUGCCA
.((((((((.(((..((((((((.............))))))))..))).))))))))..

Structure

-C        A   GA        uaaau 
  GUGUUCAC GCG  CCUUGAUU     g
  |||||||| |||  ||||||||     u
  CGUAAGUG CGC  GGAAUuaa     c
AC        G   AC        cauac 

Annotation confidence High

Genome context

JH419620.1: 64902-64961 [-]

Mature pny-miR-124-5p

• Accession: MIMAT0060319
• Description: Pundamilia nyererei pny-miR-124-5p mature miRNA
• Sequence: 1 - CGUGUUCACAGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-124-3p

• Accession: MIMAT0042896
• Description: Pundamilia nyererei pny-miR-124-3p mature miRNA
• Sequence: 40 - UAAGGCACGCGGUGAAUGCCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381