Stem-loop pny-mir-124-4

Accession

MI0034875

Description

Pundamilia nyererei pny-mir-124-4 precursor miRNA

Sequence

2882 reads, 236.0 reads per million, 7 experiments

UGUGUUCACAGUGGACCUUGAUUuaauuucaauacaauUAAGGCACGCGGUGAAUGCCA
.((((((((.(((..((((((((............))))))))..))).))))))))..

Structure

-U        A   GA        uaauu 
  GUGUUCAC GUG  CCUUGAUU     u
  |||||||| |||  ||||||||      
  CGUAAGUG CGC  GGAAUuaa     c
AC        G   AC        cauaa 

Annotation confidence High

Genome context

JH419215.1: 3164452-3164510 [-]

Mature pny-miR-124-4-5p

• Accession: MIMAT0060320
• Description: Pundamilia nyererei pny-miR-124-4-5p mature miRNA
• Sequence: 1 - UGUGUUCACAGUGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-124-3p

• Accession: MIMAT0042896
• Description: Pundamilia nyererei pny-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381